From 3dc469ed4411a066fbbe31c087b545d0d3a8bc7f Mon Sep 17 00:00:00 2001
From: DavyCats <davycats.dc@gmail.com>
Date: Wed, 8 Jan 2020 18:00:03 +0100
Subject: [PATCH] typos
---
gatk.wdl | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/gatk.wdl b/gatk.wdl
index 144d573..e04d499 100644
--- a/gatk.wdl
+++ b/gatk.wdl
@@ -115,7 +115,7 @@ task BaseRecalibrator {
recalibrationReportPath: {description: "The location to write the BQSR report to.", category: "required"}
sequenceGroupInterval: {description: "Bed files describing the regions to operate on.", category: "advancded"}
knownIndelsSitesVCFs: {description: "VCf files with known indels.", category: "advanced"}
- knownIndelsSitesVCFIndexes: {description: "The indexed for the known variant VCFs", category: "advanced"}
+ knownIndelsSitesVCFIndexes: {description: "The indexed for the known variant VCFs.", category: "advanced"}
dbsnpVCF: {description: "A dbSNP VCF.", category: "common"}
dbsnpVCFIndex: {description: "The index for the dbSNP VCF.", category: "common"}
referenceFasta: {description: "The reference fasta file which was also used for mapping.",
@@ -125,7 +125,7 @@ task BaseRecalibrator {
referenceFastaFai: {description: "The index for the reference fasta file.", category: "required"}
memory: {description: "The amount of memory this job will use.", category: "advanced"}
- javaXmx: {description: "The maximum memory available to the program. Should be lower than `memory` to accommodate JVM overhead.)",
+ javaXmx: {description: "The maximum memory available to the program. Should be lower than `memory` to accommodate JVM overhead.",
category: "advanced"}
dockerImage: {description: "The docker image used for this task. Changing this may result in errors which the developers may choose not to address.",
category: "advanced"}
--
GitLab