From 2fdabcca7e4bba7e1ba2a30d6e47dfb478e58e11 Mon Sep 17 00:00:00 2001
From: JasperBoom <jboom@infernum.nl>
Date: Wed, 7 Oct 2020 13:54:41 +0200
Subject: [PATCH] Update parameter_meta.
---
CHANGELOG.md | 1 +
nanopack.wdl | 1 +
2 files changed, 2 insertions(+)
diff --git a/CHANGELOG.md b/CHANGELOG.md
index 142622e..803c221 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -11,6 +11,7 @@ that users understand how the changes affect the new version.
version 5.0.0-dev
---------------------------
++ NanoPack: Add parameter_meta to NanoPlot task.
+ Centrifuge: Remove metrics file from classification (which causes the
summary report to be empty).
https://github.com/DaehwanKimLab/centrifuge/issues/83
diff --git a/nanopack.wdl b/nanopack.wdl
index 6860cf1..e4d1513 100644
--- a/nanopack.wdl
+++ b/nanopack.wdl
@@ -92,6 +92,7 @@ task NanoPlot {
inputFileType: {description: "The format of the read file.", category: "required"}
outputDir: {description: "Output directory path.", category: "required"}
outputPrefix: {description: "Output file prefix.", category: "required"}
+ outputPath: {description: "Combination of the outputDir & outputPrefix strings.", category: "advanced"}
outputTsvStats: {description: "Output the stats file as a properly formatted TSV.", category: "common"}
dropOutliers: {description: "Drop outlier reads with extreme long length.", category: "advanced"}
logLengths: {description: "Additionally show logarithmic scaling of lengths in plots.", category: "advanced"}
--
GitLab