diff --git a/CHANGELOG.md b/CHANGELOG.md index 142622e23f2470f0d95e088a908db0bec3eec327..803c221b620d333043eaee87b04685942c4f1362 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -11,6 +11,7 @@ that users understand how the changes affect the new version. version 5.0.0-dev --------------------------- ++ NanoPack: Add parameter_meta to NanoPlot task. + Centrifuge: Remove metrics file from classification (which causes the summary report to be empty). https://github.com/DaehwanKimLab/centrifuge/issues/83 diff --git a/nanopack.wdl b/nanopack.wdl index 6860cf13828d50b0190c88d23e62601111bffb8d..e4d15135cd1e9145ab8282b2614cc7bbbf27f5c0 100644 --- a/nanopack.wdl +++ b/nanopack.wdl @@ -92,6 +92,7 @@ task NanoPlot { inputFileType: {description: "The format of the read file.", category: "required"} outputDir: {description: "Output directory path.", category: "required"} outputPrefix: {description: "Output file prefix.", category: "required"} + outputPath: {description: "Combination of the outputDir & outputPrefix strings.", category: "advanced"} outputTsvStats: {description: "Output the stats file as a properly formatted TSV.", category: "common"} dropOutliers: {description: "Drop outlier reads with extreme long length.", category: "advanced"} logLengths: {description: "Additionally show logarithmic scaling of lengths in plots.", category: "advanced"}