diff --git a/umi-tools.wdl b/umi-tools.wdl index db888603255a458f2baa3343756efae793f2f325..5e08e14d49fb188936e9cecc98e2dcd29daa2f38 100644 --- a/umi-tools.wdl +++ b/umi-tools.wdl @@ -78,7 +78,7 @@ task Dedup { File inputBam File inputBamIndex String outputBamPath - String tmpDir + String tmpDir = "./umiToolsDedupTmpDir" Boolean paired = true