From 23af92158dec1d9110de5ba15e6a100c523fb33f Mon Sep 17 00:00:00 2001
From: DavyCats <davycats.dc@gmail.com>
Date: Fri, 14 Jun 2019 13:18:16 +0200
Subject: [PATCH] remove obsolete task, fix typo
---
biopet/biopet.wdl | 2 +-
common.wdl | 17 -----------------
2 files changed, 1 insertion(+), 18 deletions(-)
diff --git a/biopet/biopet.wdl b/biopet/biopet.wdl
index 52180b8..15f0771 100644
--- a/biopet/biopet.wdl
+++ b/biopet/biopet.wdl
@@ -179,7 +179,7 @@ task FastqSync {
output {
FastqPair out1 = object {
R1: out1path,
- R1: out2path
+ R2: out2path
}
}
diff --git a/common.wdl b/common.wdl
index d5db768..7b85d46 100644
--- a/common.wdl
+++ b/common.wdl
@@ -131,23 +131,6 @@ task MapMd5 {
}
}
-task ObjectMd5 {
- input {
- Object the_object
- }
-
- command {
- cat ~{write_object(the_object)} | md5sum - | sed -e 's/ -//'
- }
-
- output {
- String md5sum = read_string(stdout())
- }
-
- runtime {
- memory: 1
- }
-}
task StringArrayMd5 {
input {
--
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