diff --git a/CHANGELOG.md b/CHANGELOG.md index bac09da63d5fd848d8443ed98680a898cfb80042..83e8aba18b8a68c76401b5ebd94aa5ee27c67826 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -11,6 +11,7 @@ that users understand how the changes affect the new version. version 2.2.0-dev --------------------------- ++ Increase default memory of BWA mem to 32G (was 16G). + Add `memory` input to fastqc task. + Centrifuge: Fix issue where centrifuge would fail on incorrect paths. + Added GATK CNV calling tasks: diff --git a/bwa.wdl b/bwa.wdl index b0b1daf753377237c4d7f333ab6feee57b79b034..655cd28825af6d5c1be235b453fb3d591439ce08 100644 --- a/bwa.wdl +++ b/bwa.wdl @@ -9,7 +9,7 @@ task Mem { String? readgroup Int threads = 2 - String memory = "16G" + String memory = "32G" String picardXmx = "4G" # A mulled container is needed to have both picard and bwa in one container. # This container contains: picard (2.18.7), bwa (0.7.17-r1188)