diff --git a/umi-tools.wdl b/umi-tools.wdl index 35d54299ff8425090e5beb408857ea7e994fc1f7..2d244c1d9c4206cc1c40b06e98e1af87f3312ddd 100644 --- a/umi-tools.wdl +++ b/umi-tools.wdl @@ -96,9 +96,9 @@ task Dedup { output { File deduppedBam = outputBamPath File deduppedBamIndex = outputBamIndex - File? editDistance = statsPrefix + "_edit_distance.tsv" - File? umiStats = statsPrefix + "_per_umi.tsv" - File? positionStats = statsPrefix + "_per_umi_per_position.tsv" + File? editDistance = "~{statsPrefix}_edit_distance.tsv" + File? umiStats = "~{statsPrefix}_per_umi.tsv" + File? positionStats = "~{statsPrefix}_per_umi_per_position.tsv" } runtime {