From 0dd0afd61c43b625146adce4b4507ec85803381a Mon Sep 17 00:00:00 2001
From: Redmar van den Berg <RedmarvandenBerg@lumc.nl>
Date: Wed, 7 Oct 2020 14:08:02 +0200
Subject: [PATCH] Add bam index file as required input for isoseq
---
isoseq3.wdl | 1 +
1 file changed, 1 insertion(+)
diff --git a/isoseq3.wdl b/isoseq3.wdl
index 604a71d..7894b38 100644
--- a/isoseq3.wdl
+++ b/isoseq3.wdl
@@ -26,6 +26,7 @@ task Refine {
Boolean requirePolyA = false
String logLevel = "WARN"
File inputBamFile
+ File inputBamIndex
File primerFile
String outputDir
String outputNamePrefix
--
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