diff --git a/gatk.wdl b/gatk.wdl index 195627e44b5de984d7d79df93bea926723b1dddc..b5fd4a8d78ab641fd99abf6da0ae1a26f4212c7f 100644 --- a/gatk.wdl +++ b/gatk.wdl @@ -279,7 +279,7 @@ task SplitNCigarReads { output { File bam = outputBam - File bam_index = sub(outputBam, "\\.bam$", ".bai") + File bamIndex = sub(outputBam, "\\.bam$", ".bai") } runtime {