Commits · ea286e13ea9664ce43b807d0645900e1e15ea5e7 · Beatrice Tan / CNAprioritization

19 Feb, 2018 1 commit
- Updated report. · ea286e13
  Beatrice Tan authored Feb 19, 2018
  
  ea286e13
15 Feb, 2018 1 commit
- Improved structure of rules and functions. · 1a6403cd
  Beatrice Tan authored Feb 15, 2018
  
  1a6403cd
07 Feb, 2018 1 commit
- Updated reports. · f17dcbd8
  Beatrice Tan authored Feb 07, 2018
  
  f17dcbd8
05 Feb, 2018 2 commits
- Updated GO enrichment analysis to save plot. · 42ec6850
  BeatriceTan authored Feb 05, 2018
  
  42ec6850
- Updated GO scripts to use provided input file to map GO terms instead of... · 397c9d9d
  Beatrice Tan authored Feb 05, 2018
```
Updated GO scripts to use provided input file to map GO terms instead of frequently failed biomart download.
```
  397c9d9d
04 Feb, 2018 1 commit
- Updated plots for samples sizes to plot both tools. · 71025db0
  Beatrice Tan authored Feb 04, 2018
  
  71025db0
02 Feb, 2018 1 commit
- Made function names more explanatory and code better readable. · 75205c4f
  Beatrice Tan authored Feb 02, 2018
  
  75205c4f
01 Feb, 2018 1 commit
- Removed unnecessary print. · 26f20c5d
  Beatrice Tan authored Feb 01, 2018
  
  26f20c5d
31 Jan, 2018 6 commits
- Fixed P-value plot. · 82ca2106
  BeatriceTan authored Jan 31, 2018
  
  82ca2106
- Added P-value comparison. · 7f42daed
  BeatriceTan authored Jan 31, 2018
  
  7f42daed
- Fixed split errors. · 7d081506
  BeatriceTan authored Jan 31, 2018
  
  7d081506
- Updated report scripts based on new structure. · a61e8e72
  BeatriceTan authored Jan 31, 2018
  
  a61e8e72
- Split report functions to seperate files. · 44467197
  BeatriceTan authored Jan 31, 2018
  
  44467197
- Counts range of raw CN values. · 6401d987
  BeatriceTan authored Jan 31, 2018
  
  6401d987
30 Jan, 2018 3 commits
- Split recurrent regions rules into seperate files. · 25396c69
  Beatrice Tan authored Jan 30, 2018
  
  25396c69
- Updated venn diagram. · a6e291a4
  Beatrice Tan authored Jan 30, 2018
  
  a6e291a4
- Added boxplot for sizes. · 9eede366
  Beatrice Tan authored Jan 30, 2018
  
  9eede366
29 Jan, 2018 2 commits
- Updated visualizations. · 781db167
  Beatrice Tan authored Jan 29, 2018
  
  781db167
- Fixed small mistakes. · 0ba99b31
  Beatrice Tan authored Jan 29, 2018
  
  0ba99b31
28 Jan, 2018 3 commits
- Updated overlap function and added submit script. · 7a860865
  Beatrice Tan authored Jan 28, 2018
  
  7a860865
- Updated report on sample sizes. · 4592528e
  Beatrice Tan authored Jan 28, 2018
  
  4592528e
- Added settings and table with all recurrent regions. · 7c36cd45
  Beatrice Tan authored Jan 28, 2018
  
  7c36cd45
27 Jan, 2018 1 commit
- Updated reports. · 1b50acb5
  Beatrice Tan authored Jan 27, 2018
  
  1b50acb5
26 Jan, 2018 4 commits
- Reference file as input for rules to use correct ensembl version. · 88b15b8c
  Beatrice Tan authored Jan 26, 2018
  
  88b15b8c
- Updated imports. · cddbbceb
  Beatrice Tan authored Jan 26, 2018
  
  cddbbceb
- Splitted report functions in two seperate scripts. · 4e7e93dd
  Beatrice Tan authored Jan 26, 2018
  
  4e7e93dd
- Improved gene ID - name transformation for reports. · b17d4862
  Beatrice Tan authored Jan 26, 2018
  
  b17d4862
25 Jan, 2018 5 commits
- Small improvement plot. · bf9299ab
  BeatriceTan authored Jan 25, 2018
  
  bf9299ab
- Improved size plot. · 870b91dd
  BeatriceTan authored Jan 25, 2018
  
  870b91dd
- Fixed gene list errors. · 57d887c0
  BeatriceTan authored Jan 25, 2018
  
  57d887c0
- Fixed function to make rubic marker file. · c4120f2d
  BeatriceTan authored Jan 25, 2018
  
  c4120f2d
- Removed small errors. · f1bab812
  BeatriceTan authored Jan 25, 2018
  
  f1bab812
24 Jan, 2018 3 commits
- Improved wrapper links. · 7e036510
  Beatrice Tan authored Jan 24, 2018
  
  7e036510
- Fixed errors. · dc2fa967
  Beatrice Tan authored Jan 24, 2018
  
  dc2fa967
- Moved scripts to seperate directory, added content to README. · d5f7ffb4
  Beatrice Tan authored Jan 24, 2018
  
  d5f7ffb4
23 Jan, 2018 2 commits
- Improved plot function · 191a0c32
  Beatrice Tan authored Jan 23, 2018
  
  191a0c32
- Added function to make histogram of sizes of recurrent regions. · af88134a
  Beatrice Tan authored Jan 23, 2018
  
  af88134a
22 Jan, 2018 3 commits
- Updated script to install gistic2. · 3f4d8a1b
  Beatrice Tan authored Jan 22, 2018
  
  3f4d8a1b
- Solved confusion on bp/kbp/mbp in tables and plots. · f2d42153
  BeatriceTan authored Jan 22, 2018
  
  f2d42153
- Updated calls to classes. · 99a1bc63
  Beatrice Tan authored Jan 22, 2018
  
  99a1bc63