Commits · 2d3389cc79664949c45b33c641777c70f61f1903 · Beatrice Tan / CNAprioritization

02 Feb, 2018 1 commit
- Removed ensembl function. · 2d3389cc
  Beatrice Tan authored Feb 02, 2018
  
  2d3389cc
01 Feb, 2018 22 commits
- Update run_pipeline_cluster.sh to prevent the need to specify config an snakefile location. · f7bc787b
  Beatrice Tan authored Feb 01, 2018
  
  f7bc787b
- Update GISTIC2.smk · ae28e193
  Beatrice Tan authored Feb 01, 2018
  
  ae28e193
- Update GISTIC2.smk · d164e88d
  Beatrice Tan authored Feb 01, 2018
  
  d164e88d
- Update wrapper.py for GISTIC install. · 24140414
  Beatrice Tan authored Feb 01, 2018
  
  24140414
- Enabled installing gistic when directory already exists. · 3aa9679c
  Beatrice Tan authored Feb 01, 2018
  
  3aa9679c
- Added workflow image. · 46b3980c
  Beatrice Tan authored Feb 01, 2018
  
  46b3980c
- Update README.md · b080cfda
  Beatrice Tan authored Feb 01, 2018
  
  b080cfda
- Update README.md · 2b030fc3
  Beatrice Tan authored Feb 01, 2018
  
  2b030fc3
- Update README.md · 36bea04a
  Beatrice Tan authored Feb 01, 2018
  
  36bea04a
- Update README.md · 5696831c
  Beatrice Tan authored Feb 01, 2018
  
  5696831c
- Update README.md · 0440ad53
  Beatrice Tan authored Feb 01, 2018
  
  0440ad53
- Update README.md · 9fc9d828
  Beatrice Tan authored Feb 01, 2018
  
  9fc9d828
- Updated README.md with correct info. · 0c21158a
  Beatrice Tan authored Feb 01, 2018
  
  0c21158a
- Removed unnecessary print. · 26f20c5d
  Beatrice Tan authored Feb 01, 2018
  
  26f20c5d
- Update Circos.yaml · 21956d3c
  Beatrice Tan authored Feb 01, 2018
  
  21956d3c
- Update README.md · 2e656ae2
  Mei authored Feb 01, 2018
  
  2e656ae2
- Update Circos.py · 574ddcdf
  Beatrice Tan authored Feb 01, 2018
  
  574ddcdf
- Changed path into parameter. · 8a70edc2
  Beatrice Tan authored Feb 01, 2018
  
  8a70edc2
- Removed print with old parameter. · e1120ae8
  Beatrice Tan authored Feb 01, 2018
  
  e1120ae8
- Delete run_pipeline.sh · 3c9a051b
  Beatrice Tan authored Feb 01, 2018
  
  3c9a051b
- Update Snakefile · 1335a2e5
  Beatrice Tan authored Feb 01, 2018
  
  1335a2e5
- Update config.yaml · c831d14d
  Beatrice Tan authored Feb 01, 2018
  
  c831d14d
31 Jan, 2018 10 commits
- Merge branch 'master' of https://gitlab.com/BeatriceTan/PrioritizationCNAs · 063e5890
  BeatriceTan authored Jan 31, 2018
  
  063e5890
- Fixed P-value plot. · 82ca2106
  BeatriceTan authored Jan 31, 2018
  
  82ca2106
- Updated for cluster and fixed bed rule dependency. · aebc3574
  Tan authored Jan 31, 2018
  
  aebc3574
- Merged shark and pc. · 2defc593
  Tan authored Jan 31, 2018
  
  2defc593
- Updated config for shark. · 625b27fb
  Tan authored Jan 31, 2018
  
  625b27fb
- Added P-value comparison. · 7f42daed
  BeatriceTan authored Jan 31, 2018
  
  7f42daed
- Fixed split errors. · 7d081506
  BeatriceTan authored Jan 31, 2018
  
  7d081506
- Updated report scripts based on new structure. · a61e8e72
  BeatriceTan authored Jan 31, 2018
  
  a61e8e72
- Split report functions to seperate files. · 44467197
  BeatriceTan authored Jan 31, 2018
  
  44467197
- Counts range of raw CN values. · 6401d987
  BeatriceTan authored Jan 31, 2018
  
  6401d987
30 Jan, 2018 7 commits
- Updated submit script and sample sizess test. · 6babeff8
  Tan authored Jan 30, 2018
  
  6babeff8
- Merge branch 'master' of gitlab.com:BeatriceTan/PrioritizationCNAs · c2324bc0
  Beatrice Tan authored Jan 30, 2018
  
  c2324bc0
- Added input files. · f5eb11e0
  Beatrice Tan authored Jan 30, 2018
  
  f5eb11e0
- Updated submit script. · 1c6a26f1
  Tan authored Jan 30, 2018
  
  1c6a26f1
- Attempt to plot regions. · ed42f984
  Beatrice Tan authored Jan 30, 2018
  
  ed42f984
- Comparison bed files. · 914ac322
  Beatrice Tan authored Jan 30, 2018
  
  914ac322
- Seperated circos rules into seperate file. · e56d6386
  Beatrice Tan authored Jan 30, 2018
  
  e56d6386