Update GISTIC2.smk

rules/GISTIC2.smk

@@ -13,7 +13,7 @@ rule install_gistic:
 rule run_gistic:
     """Run GISTIC2 for the tumor segmentation data."""
     input:
-        os.path.join(config["gisticdir"], "gistic2"),
+        gistic_dir=os.path.join(config["gisticdir"], "gistic2"),
         seg="Input/Segments_tumor.txt"
     output:
         "GISTIC/all_lesions.conf_" + config["gistic_precision"] + ".txt",